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Handling Editor: Sunshine Van Bael (Ed.)Abstract Pioneer trees require high‐light environments for successful seedling establishment. Consequently, seeds of these species often persist in the soil seed bank (SSB) for periods ranging from several weeks to decades. How they survive despite extensive pressure from seed predators and soil‐borne pathogens remains an intriguing question.This study aims to test the hypotheses that decades‐old seeds collected from the SSB in a lowland tropical forest remain viable by (i) escaping infection by fungi, which are major drivers of seed mortality in tropical soils, and/or (ii) maintaining high levels of seed dormancy and seed coat integrity when compared to inviable seeds.We collected seeds ofTrema micranthaandZanthoxylum ekmaniiat Barro Colorado Island, Panama, from sites where adult trees previously occurred in the past 30 years. We used carbon dating to measure seed age and characterized seed coat integrity, seed dormancy and fungal communities.Viable seeds from the SSB ranged in age from 9 to 30 years forT. micrantha, and 5 to 33 years forZ. ekmanii. We found no evidence that decades‐old seeds maintain high levels of seed dormancy or seed coat integrity. Fungi were rarely detected in fresh seeds (no soil contact), but phylogenetically diverse fungi were detected often in seeds from the SSB. Although fungal infections were more commonly detected in inviable seeds than in viable seeds, a lack of differences in fungal diversity and community composition between viable and inviable seeds suggested that viable seeds are not simply excluding fungal species to survive long periods in the SSB.Synthesis.Our findings reveal the importance of a previously understudied aspect of seed survival, where the impact of seed–microbial interactions may be critical to understand long‐term persistence in the SSB. Read the freePlain Language Summaryfor this article on the Journal blog.more » « less
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Abstract Sea ice primary production is considered a valuable energy source for Arctic marine food webs, yet the extent remains unclear through existing methods. Here we quantify ice algal carbon signatures using unique lipid biomarkers in over 2300 samples from 155 species including invertebrates, fish, seabirds, and marine mammals collected across the Arctic shelves. Ice algal carbon signatures were present within 96% of the organisms investigated, collected year-round from January to December, suggesting continuous utilization of this resource despite its lower proportion to pelagic production. These results emphasize the importance of benthic retention of ice algal carbon that is available to consumers year-round. Finally, we suggest that shifts in the phenology, distribution and biomass of sea ice primary production anticipated with declining seasonal sea ice will disrupt sympagic-pelagic-benthic coupling and consequently the structure and the functioning of the food web which is critical for Indigenous Peoples, commercial fisheries, and global biodiversity.more » « less
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Abstract From >1000 orbits of HST imaging, we present deep homogeneous resolved star color–magnitude diagrams that reach the oldest main-sequence turnoff and uniformly measured star formation histories (SFHs) of 36 dwarf galaxies (−6 ≥MV≥ −17) associated with the M31 halo, and for 10 additional fields in M31, M33, and the Giant Stellar Stream. From our SFHs, we find: (i) The median stellar age and quenching epoch of M31 satellites correlate with galaxy luminosity and galactocentric distance. Satellite luminosity and present-day distance from M31 predict the satellite quenching epoch to within 1.8 Gyr at all epochs. This tight relationship highlights the fundamental connection between satellite halo mass, environmental history, and star formation duration. (ii) There is no difference between the median SFH of galaxies on and off the great plane of Andromeda satellites. (iii) ~50% of our M31 satellites show prominent ancient star formation (>12 Gyr ago) followed by delayed quenching (8–10 Gyr ago), which is not commonly observed among the MW satellites. (iv) A comparison with TNG50 and FIRE-2 simulated satellite dwarfs around M31-like hosts shows that some of these trends (dependence of SFH on satellite luminosity) are reproduced in the simulations while others (dependence of SFH on galactocentric distance, presence of the delayed-quenching population) are weaker or absent. We provide all photometric catalogs and SFHs as High-Level Science Products on MAST.more » « less
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Zoonoses are infectious diseases transmitted from animals to humans. Bats have been suggested to harbour more zoonotic viruses than any other mammalian order1. Infections in bats are largely asymptomatic2,3, indicating limited tissue-damaging inflammation and immunopathology. To investigate the genomic basis of disease resistance, the Bat1K project generated reference-quality genomes of ten bat species, including potential viral reservoirs. Here we describe a systematic analysis covering 115 mammalian genomes that revealed that signatures of selection in immune genes are more prevalent in bats than in other mammalian orders. We found an excess of immune gene adaptations in the ancestral chiropteran branch and in many descending bat lineages, highlighting viral entry and detection factors, and regulators of antiviral and inflammatory responses. ISG15, which is an antiviral gene contributing to hyperinflammation during COVID-19 (refs. 4,5), exhibits key residue changes in rhinolophid and hipposiderid bats. Cellular infection experiments show species- specific antiviral differences and an essential role of protein conjugation in antiviral function of bat ISG15, separate from its role in secretion and inflammation in humans. Furthermore, in contrast to humans, ISG15 in most rhinolophid and hipposiderid bats has strong anti-SARS-CoV-2 activity. Our work reveals molecular mechanisms that contribute to viral tolerance and disease resistance in bats.more » « less
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For any given neural network architecture a permutation of weights and biases results in the same functional network. This implies that optimization algorithms used to 'train' or 'learn' the network are faced with a very large number (in the millions even for small networks) of equivalent optimal solutions in the parameter space. To the best of our knowledge, this observation is absent in the literature. In order to narrow down the parameter search space, a novel technique is introduced in order to fix the bias vector configurations to be monotonically increasing. This is achieved by augmenting a typical learning problem with inequality constraints on the bias vectors in each layer. A Moreau-Yosida regularization based algorithm is proposed to handle these inequality constraints and a theoretical convergence of this algorithm is established. Applications of the proposed approach to standard trigonometric functions and more challenging stiff ordinary differential equations arising in chemically reacting flows clearly illustrate the benefits of the proposed approach. Further application of the approach on the MNIST dataset within TensorFlow, illustrate that the presented approach can be incorporated in any of the existing machine learning libraries.more » « less
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Abstract Our understanding of the kinematic properties of multiple stellar populations (mPOPs) in Galactic globular clusters (GCs) is still limited compared to what we know about their chemical and photometric characteristics. Such limitation arises from the lack of a comprehensive observational investigation of this topic. Here we present the first homogeneous kinematic analysis of mPOPs in 56 GCs based on high-precision proper motions computed with Hubble Space Telescope data. We focused on red-giant-branch stars, for which the mPOP tagging is clearer, and measured the velocity dispersion of stars belonging to first (1G) and second generations (2G). We find that 1G stars are generally kinematically isotropic even at the half-light radius, whereas 2G stars are isotropic at the center and become radially anisotropic before the half-light radius. The radial anisotropy is induced by a lower tangential velocity dispersion of 2G stars with respect to the 1G population, while the radial component of the motion is comparable. We also show possible evidence that the kinematic properties of mPOPs are affected by the Galactic tidal field, corroborating previous observational and theoretical results suggesting a relation between the strength of the external tidal field and some properties of mPOPs. Although limited to the GCs’ central regions, our analysis leads to new insights into the mPOP phenomenon, and provides the motivation for future observational studies of the internal kinematics of mPOPs.more » « less
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